Topic says everything. Im not sure if its intended or not, but its kinda confusing if the worl map shows 3 science on a tile, but it actually only yields one for the city.

Yes. And this bug works too for the last quest ligne reward of the Mykara : the x3 FIDSI for all fungal bloom. It does not work.

Note: its the same for cultist villages (and always has been).

I reported this in the beta and the devs confirmed that this is inteded. They said it would be too powerful otherwise.